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Assay category
1
DNA methylation
Assay
863
ChIP-seq
382
total RNA-seq
181
ATAC-seq
115
single cell RNA-seq
56
snATAC-seq
33
DNase-seq
32
pCHi-C
13
Hi-C
10
RRBS
5
GRO-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
HiChIP
2
small RNA-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
1
FAIRE-seq
1
MPRA
1
WGBS
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
1
AMP
RFA
1
AMP
Experiment status
1
released
Genome assembly (visualization)
1
GRCh38
Organism
1
Homo sapiens
Biosample type
tissue
1
cell line
Organ
47
epithelium
pancreas
1
liver
Life stage
1
child
Available data
1
bam
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
1
fastq
Platform
1
Illumina HiSeq X Ten
Run type
1
paired-ended
Read length (nt)
1
151
Library made from
1
DNA
Date released
1
November, 2018
Lab
1
AMP-T2D consortium
Replication type
1
isogenic
organ_slims!
pancreas
biosample_type!
tissue
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Experiment
TSTSR496DZA
released
WGBS
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP