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Schema
Citing CMDGA
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Assay category
5
DNA methylation
Assay
398
ChIP-seq
27
single cell RNA-seq
22
total RNA-seq
11
snATAC-seq
7
ATAC-seq
5
WGBS
4
DNase-seq
2
Hi-C
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
4
GRCh38
Organism
5
Homo sapiens
Biosample type
4
tissue
1
cell line
Organ
6
epithelium
pancreas
2
heart
2
liver
1
adipose tissue
1
connective tissue
Life stage
17
adult
5
child
2
embryonic
Available data
4
bam
4
bed bedMethyl
4
bigBed bedMethyl
4
bigWig
3
fastq
Platform
2
Illumina HiSeq 2500
1
Illumina HiSeq X Ten
Run type
2
single-ended
1
paired-ended
Read length (nt)
2
100
1
151
Library made from
5
DNA
Date released
2
August, 2017
2
July, 2019
1
November, 2018
Lab
5
AMP-T2D consortium
Replication type
4
unreplicated
1
isogenic
organ_slims!
pancreas
Showing 5 of 5 results
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Experiment
DSR790KQG
released
WGBS
of heart right ventricle
Homo sapiens
heart right ventricle male child (3 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR108KUP
released
WGBS
of heart left ventricle
Homo sapiens
heart left ventricle male child (3 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR496DZA
released
WGBS
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR031119
released
WGBS
of adipose tissue
Homo sapiens
adipose tissue male child (3 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR621783
released
WGBS
of liver
Homo sapiens
liver male child (3 years)
Lab:
AMP-T2D consortium
Project:
AMP