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Schema
Citing CMDGA
Clear Filters
Assay category
5
3D chromatin structure
Assay
99
ChIP-seq
61
total RNA-seq
46
ATAC-seq
9
DNase-seq
6
single cell RNA-seq
5
Hi-C
2
WGBS
1
FAIRE-seq
1
pCHi-C
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
5
hg19
Organism
6
Homo sapiens
Biosample type
4
primary cell
2
tissue
Organ
10
pancreas
8
epithelium
7
liver
7
musculature of body
6
blood vessel
6
connective tissue
6
heart
6
vasculature
5
brain
4
eye
4
limb
3
kidney
2
adipose tissue
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone element
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
urinary bladder
Life stage
5
unknown
1
adult
Available data
3
hic
2
bed bed3+
2
bedpe bed3+
2
bigWig
2
hdf5
1
tsv
Library made from
6
DNA
Date released
3
March, 2020
2
July, 2019
1
October, 2019
Lab
6
AMP-T2D consortium
Replication type
2
anisogenic
2
isogenic
2
unreplicated
Audit category:
1
audit script error
Showing 6 of 6 results
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Experiment
DSR562HCT
released
pCHi-C
of aorta
Homo sapiens
aorta
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR073ZJB
released
Hi-C
of aorta
Homo sapiens
aorta female adult (30 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR430XOJ
released
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR251SCT
released
Audit error
1
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR933OWU
released
Hi-C
of endothelial cell of hepatic sinusoid
Homo sapiens
endothelial cell of hepatic sinusoid
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR240JNB
released
Hi-C
of brain microvascular endothelial cell
Homo sapiens
brain microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP