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Assay
572
ChIP-seq
90
ATAC-seq
49
total RNA-seq
22
DNase-seq
19
RRBS
10
Hi-C
8
WGBS
8
pCHi-C
6
MeRIP-seq
6
single cell RNA-seq
4
STARR-seq
4
snATAC-seq
1
FAIRE-seq
Project
T1D
8
AMP
RFA
8
AMP
Experiment status
8
released
Genome assembly (visualization)
3
hg19
Organism
8
Homo sapiens
Biosample type
6
cell line
2
in vitro differentiated cells
Organ
2
kidney
2
liver
1
mammary gland
Life stage
5
unknown
3
adult
Available data
5
tsv
2
bedpe bed3+
2
ibed
1
bed bed3+
Library made from
8
DNA
Date released
6
March, 2020
1
February, 2021
1
May, 2020
Lab
8
AMP-T2D consortium
Replication type
24
anisogenic
8
isogenic
8
unreplicated
Audit category:
4
inconsistent ontology term
award.project!
T1D
Showing 8 of 8 results
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Experiment
DSR583PNT
released
pCHi-C
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR469VYN
released
pCHi-C
of fibroblast cell line
Homo sapiens
fibroblast cell line
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR452PKJ
released
pCHi-C
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR535XNG
released
Audit error
1
pCHi-C
of lymphocyte of B lineage (iPSC)
Homo sapiens
lymphocyte of B lineage (iPSC)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR382TEU
released
Audit error
1
pCHi-C
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR449QWM
released
Audit error
1
pCHi-C
of RCC 7860 VHL
Homo sapiens
RCC 7860 VHL
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR352APC
released
pCHi-C
of MCF-7
Homo sapiens
MCF-7
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR077AQW
released
Audit error
1
pCHi-C
of RCC 7860 vector
Homo sapiens
RCC 7860 vector
Lab:
AMP-T2D consortium
Project:
AMP