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Citing CMDGA
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Assay
67
ChIP-seq
17
ATAC-seq
12
total RNA-seq
5
DNase-seq
4
pCHi-C
2
Capture-C
1
Hi-C
1
RNA microarray
1
RRBS
1
WGBS
Project
3
AMP
1
T1D
RFA
3
AMP
1
T1D
Experiment status
4
released
Organism
4
Homo sapiens
Biosample type
1
in vitro differentiated cells
1
primary cell
1
stem cell
1
tissue
Organ
4
connective tissue
3
heart
2
adipose tissue
2
brain
2
intestine
2
kidney
2
liver
2
thymus
1
adrenal gland
1
blood vessel
1
bone element
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
musculature of body
1
ovary
1
pancreas
1
small intestine
1
spleen
1
stomach
1
urinary bladder
1
vasculature
Life stage
4
unknown
adult
Available data
2
tsv
1
bedpe bed3+
1
fastq
Platform
1
Illumina HiSeq 4000
Run type
1
paired-ended
Read length (nt)
1
69
Library made from
4
DNA
Date released
2
March, 2020
1
August, 2018
1
May, 2021
Lab
3
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Replication type
2
anisogenic
1
isogenic
1
unreplicated
Audit category:
1
inconsistent ontology term
organ_slims!
musculature of body
replicates.library.biosample.life_stage!
adult
Showing 4 of 4 results
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Experiment
DSR916ELW
released
pCHi-C
of adult endothelial progenitor cell
Homo sapiens
adult endothelial progenitor cell
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR881MKA
released
Audit error
1
pCHi-C
of mesenchymal stem cell
Homo sapiens
mesenchymal stem cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR437GEP
released
pCHi-C
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR423QSN
released
pCHi-C
of white fat cell
Homo sapiens
white adipose cell
Lab:
AMP-T2D consortium
Project:
AMP