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Assay
472
total RNA-seq
142
ChIP-seq
22
ATAC-seq
8
DNase-seq
6
WGBS
4
pCHi-C
single cell RNA-seq
3
small RNA-seq
2
Capture-C
1
Hi-C
1
RNA microarray
Project
3
AMP
1
T1D
RFA
3
AMP
1
T1D
Experiment status
4
released
Genome assembly (visualization)
1
hg19
Organism
4
Homo sapiens
Biosample type
2
primary cell
1
in vitro differentiated cells
1
tissue
Organ
4
connective tissue
4
eye
3
heart
3
liver
2
adipose tissue
2
brain
2
intestine
2
thymus
1
adrenal gland
1
blood vessel
1
bone element
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
musculature of body
1
ovary
1
pancreas
1
small intestine
1
spleen
1
vasculature
Life stage
3
unknown
1
adult
Available data
1
bam
1
bed bed3+
1
bedpe bed3+
1
fastq
1
tsv
Platform
1
Illumina HiSeq 4000
Run type
1
paired-ended
Read length (nt)
1
69
Library made from
4
DNA
Date released
1
August, 2018
1
February, 2021
1
March, 2020
1
May, 2021
Lab
3
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Replication type
2
anisogenic
1
isogenic
1
unreplicated
Audit category:
inconsistent ontology term
assay_title!
single cell RNA-seq
audit.ERROR.category!
inconsistent ontology term
Showing 4 of 4 results
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Experiment
DSR241RZY
released
pCHi-C
of osteoblast
Homo sapiens
osteoblast adult
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR916ELW
released
pCHi-C
of adult endothelial progenitor cell
Homo sapiens
adult endothelial progenitor cell
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR437GEP
released
pCHi-C
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR423QSN
released
pCHi-C
of white fat cell
Homo sapiens
white adipose cell
Lab:
AMP-T2D consortium
Project:
AMP