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Assay
474
total RNA-seq
153
ChIP-seq
25
ATAC-seq
9
DNase-seq
6
WGBS
4
single cell RNA-seq
3
pCHi-C
small RNA-seq
2
Capture-C
1
Hi-C
1
RNA microarray
1
RRBS
Project
2
AMP
1
T1D
RFA
2
AMP
1
T1D
Experiment status
3
released
Genome assembly (visualization)
1
hg19
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
in vitro differentiated cells
Organ
4
eye
3
connective tissue
2
liver
1
adipose tissue
1
bone element
1
bone marrow
1
thymus
Life stage
2
unknown
1
adult
Available data
1
bam
1
bed bed3+
1
bedpe bed3+
1
fastq
Platform
1
Illumina HiSeq 4000
Run type
1
paired-ended
Read length (nt)
1
69
Library made from
3
DNA
Date released
March, 2020
1
August, 2018
1
February, 2021
1
May, 2021
Lab
2
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Replication type
1
anisogenic
1
isogenic
1
unreplicated
assay_title!
small RNA-seq
month_released!
March, 2020
Showing 3 of 3 results
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Experiment
DSR241RZY
released
pCHi-C
of osteoblast
Homo sapiens
osteoblast adult
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR916ELW
released
pCHi-C
of adult endothelial progenitor cell
Homo sapiens
adult endothelial progenitor cell
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
TSTSR423QSN
released
pCHi-C
of white fat cell
Homo sapiens
white adipose cell
Lab:
AMP-T2D consortium
Project:
AMP