Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay category
3
Transcription
Assay
474
total RNA-seq
153
ChIP-seq
25
ATAC-seq
9
DNase-seq
6
WGBS
4
pCHi-C
4
single cell RNA-seq
3
small RNA-seq
2
Capture-C
1
Hi-C
1
RNA microarray
1
RRBS
Project
6
AMP
1
T1D
RFA
6
AMP
1
T1D
Experiment status
7
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
7
Homo sapiens
Biosample type
3
primary cell
3
tissue
1
stem cell
Organ
7
connective tissue
6
brain
6
liver
4
adipose tissue
4
eye
4
heart
3
kidney
3
musculature of body
3
pancreas
2
intestine
2
thymus
1
adrenal gland
1
blood vessel
1
bone element
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
urinary bladder
1
vasculature
Life stage
4
adult
3
unknown
Available data
5
tsv
4
bam
3
bigWig
1
bed bed3+
bedpe bed3+
1
fastq
Library made from
4
DNA
3
RNA
Date released
3
July, 2019
2
March, 2020
1
February, 2021
1
May, 2021
Lab
6
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Replication type
4
anisogenic
2
unreplicated
1
isogenic
Audit category:
1
inconsistent ontology term
files.file_type!
bedpe bed3+
Showing 7 of 7 results
table-tab-icon
matrix-icon
Download
Experiment
DSR241RZY
released
pCHi-C
of osteoblast
Homo sapiens
osteoblast adult
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR916ELW
released
pCHi-C
of adult endothelial progenitor cell
Homo sapiens
adult endothelial progenitor cell
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR881MKA
released
Audit error
1
pCHi-C
of mesenchymal stem cell
Homo sapiens
mesenchymal stem cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR437GEP
released
pCHi-C
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR322WAZ
released
small RNA-seq
of subcutaneous adipose tissue
Homo sapiens
subcutaneous adipose tissue female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR882SMA
released
small RNA-seq
of omental fat pad
Homo sapiens
omental fat pad male adult (37 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR483BAA
released
small RNA-seq
of mesenchymal stem cell of adipose
Homo sapiens
mesenchymal stem cell of adipose female adult (37 years) and female adult (42 years)
Lab:
AMP-T2D consortium
Project:
AMP