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Assay
1286
total RNA-seq
1076
ChIP-seq
336
ATAC-seq
274
single cell RNA-seq
163
DNase-seq
87
RNA microarray
72
snATAC-seq
67
WGBS
15
Hi-C
7
small RNA-seq
5
pCHi-C
4
GRO-seq
2
Capture-C
2
HiChIP
2
RRBS
1
CRISPR genome editing followed by sgRNA sequencing
1
FAIRE-seq
1
MPRA
1
STARR-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
1
snDrop-seq
1
whole genome sequencing assay
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Organism
5
Homo sapiens
Biosample type
4
tissue
stem cell
1
in vitro differentiated cells
Organ
4
eye
1
adipose tissue
1
connective tissue
Life stage
4
adult
1
unknown
Available data
1
bedpe bed3+
1
fastq
Platform
1
Illumina HiSeq 4000
Run type
1
paired-ended
Read length (nt)
1
69
Library made from
5
DNA
Date released
4
October, 2019
1
August, 2018
Lab
5
AMP-T2D consortium
Replication type
27
anisogenic
21
isogenic
5
unreplicated
biosample_type!
stem cell
Showing 5 of 5 results
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Experiment
DSR896KME
released
pCHi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (32 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR691JIZ
released
pCHi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans male adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR563ZWW
released
pCHi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (67 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR072PQG
released
pCHi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans male adult (40 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR423QSN
released
pCHi-C
of white fat cell
Homo sapiens
white adipose cell
Lab:
AMP-T2D consortium
Project:
AMP