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Assay category
3
Transcription
Assay
462
ChIP-seq
66
ATAC-seq
49
total RNA-seq
19
DNase-seq
18
pCHi-C
11
RRBS
7
Hi-C
6
MeRIP-seq
4
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
WGBS
3
single cell RNA-seq
1
FAIRE-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
3
Homo sapiens
Target of assay
1
control
Biosample type
2
in vitro differentiated cells
1
primary cell
Organ
1
brain
Life stage
adult
2
unknown
1
child
Available data
3
tsv
1
bam
1
bigWig
Library made from
2
RNA
1
DNA
Date released
2
December, 2019
1
July, 2019
Lab
3
AMP-T2D consortium
Replication type
132
unreplicated
12
anisogenic
3
isogenic
Audit category:
2
audit script error
2
inconsistent ontology term
files.read_length!
91
replicates.library.biosample.life_stage!
adult
Showing 3 of 3 results
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Experiment
DSR690SBQ
released
Audit error
2
single cell RNA-seq
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR054HMA
released
Audit error
2
single cell RNA-seq
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR344ZYZ
released
single cell RNA-seq
of cerebellar granule cell
Homo sapiens
cerebellar granule cell male child (6 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP