Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay category
3
Transcription
Assay
1831
ChIP-seq
531
ATAC-seq
212
DNase-seq
84
snATAC-seq
75
WGBS
68
total RNA-seq
57
pCHi-C
34
Hi-C
21
RRBS
5
FAIRE-seq
5
GRO-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
single cell RNA-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
RNA microarray
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
3
AMP
2
T1D
RFA
3
AMP
2
T1D
Experiment status
5
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
5
Homo sapiens
Target of assay
3
control
Biosample type
3
primary cell
2
cell line
Organ
3
brain
Life stage
2
adult
2
unknown
1
child
Available data
3
bam
3
bigWig
3
tsv
Library made from
RNA
5
DNA
Date released
3
July, 2019
2
February, 2023
Lab
3
AMP-T2D consortium
2
Kyle Gaulton, UCSD
Replication type
3
isogenic
2
unreplicated
replicates.library.nucleic_acid_term_name!
RNA
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
Experiment
DSR498QQL
released
HiChIP
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR895OVT
released
HiChIP
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR957CBL
released
single cell RNA-seq
of Purkinje cell
Homo sapiens
Purkinje cell male adult (20 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR519VXU
released
single cell RNA-seq
of cerebellar granule cell
Homo sapiens
cerebellar granule cell male adult (20 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR344ZYZ
released
single cell RNA-seq
of cerebellar granule cell
Homo sapiens
cerebellar granule cell male child (6 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP