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Assay category
5
Transcription
Assay
1455
ChIP-seq
952
total RNA-seq
292
ATAC-seq
270
single cell RNA-seq
178
DNase-seq
87
RNA microarray
70
snATAC-seq
29
pCHi-C
24
WGBS
22
Hi-C
19
RRBS
5
GRO-seq
5
STARR-seq
5
small RNA-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
FAIRE-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
snDrop-seq
1
whole genome sequencing assay
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Organ
3
liver
2
adipose tissue
2
connective tissue
pancreas
Life stage
4
adult
1
embryonic
Available data
5
bam
5
bigWig
5
tsv
Library made from
5
RNA
Date released
5
July, 2019
Lab
5
AMP-T2D consortium
Replication type
anisogenic
5
unreplicated
organ_slims!
pancreas
replication_type!
anisogenic
Showing 5 of 5 results
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Experiment
DSR322WAZ
released
small RNA-seq
of subcutaneous adipose tissue
Homo sapiens
subcutaneous adipose tissue female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR043CMH
released
small RNA-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR467AXQ
released
small RNA-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR882SMA
released
small RNA-seq
of omental fat pad
Homo sapiens
omental fat pad male adult (37 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR494RGE
released
small RNA-seq
of liver
Homo sapiens
liver female embryo (20 weeks)
Lab:
AMP-T2D consortium
Project:
AMP