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Assay category
8
DNA accessibility
Assay
1783
ChIP-seq
1336
total RNA-seq
471
ATAC-seq
222
single cell RNA-seq
212
DNase-seq
87
RNA microarray
40
pCHi-C
Hi-C
28
WGBS
21
RRBS
18
small RNA-seq
10
MeRIP-seq
8
snATAC-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
snDrop-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
1
whole genome sequencing assay
Project
48
HPAP
18
T1D
10
LungMap
8
AMP
RFA
6
AMP2
2
AMP
Experiment status
8
released
Genome assembly (visualization)
1
hg19
Organism
8
Homo sapiens
Biosample type
8
tissue
Organ
6
kidney
1
musculature of body
1
pancreas
Life stage
6
adult
2
unknown
Available data
1
bed bed3+
1
txt
Library made from
8
DNA
Date released
6
August, 2021
1
August, 2022
1
May, 2022
Lab
6
Katalin Susztak, Upenn
2
AMP-T2D consortium
Replication type
4
isogenic
3
unreplicated
1
anisogenic
Audit category:
2
audit script error
assay_title!
Hi-C
Showing 8 of 8 results
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Experiment
DSR260JLJ
released
Audit error
1
snATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR127IDO
released
Audit error
1
snATAC-seq
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR573GUG
released
snATAC-seq
of kidney
Homo sapiens
kidney female adult (65 years)
Lab:
Katalin Susztak, Upenn
Project:
AMP
Experiment
DSR988IHH
released
snATAC-seq
of kidney
Homo sapiens
kidney male adult (74 years)
Lab:
Katalin Susztak, Upenn
Project:
AMP
Experiment
DSR992XSL
released
snATAC-seq
of kidney
Homo sapiens
kidney female adult (85 years)
Lab:
Katalin Susztak, Upenn
Project:
AMP
Experiment
DSR056RSW
released
snATAC-seq
of kidney
Homo sapiens
kidney male adult (52 years)
Lab:
Katalin Susztak, Upenn
Project:
AMP
Experiment
DSR060OQF
released
snATAC-seq
of kidney
Homo sapiens
kidney female adult (85 years)
Lab:
Katalin Susztak, Upenn
Project:
AMP
Experiment
DSR223KQW
released
snATAC-seq
of kidney
Homo sapiens
kidney female adult (70 years)
Lab:
Katalin Susztak, Upenn
Project:
AMP