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Assay category
1
DNA accessibility
1
DNA sequencing
Assay
381
ChIP-seq
299
total RNA-seq
128
ATAC-seq
49
pCHi-C
20
DNase-seq
11
RRBS
9
Hi-C
6
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
4
single cell RNA-seq
4
snATAC-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
2
RNA microarray
1
FAIRE-seq
1
snDrop-seq
1
whole genome sequencing assay
Project
2
AMP
RFA
1
AMP
1
AMP2
Experiment status
2
released
Genome assembly (visualization)
1
hg19
Organism
2
Homo sapiens
Biosample type
1
cell line
1
tissue
Organ
1
liver
1
pancreas
Life stage
3
adult
2
unknown
1
newborn
Available data
1
bam
1
bed narrowPeak
1
bigBed narrowPeak
1
bigWig
1
fastq
1
vcf
Platform
1
Illumina Genome Analyzer I
Run type
1
single-ended
Read length (nt)
1
35
Library made from
2
DNA
Date released
1
August, 2017
1
August, 2021
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
Replication type
2
unreplicated
Showing 2 of 2 results
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Experiment
DSR246XUG
released
whole genome sequencing assay
of HepG2
Homo sapiens
HepG2
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
TSTSR121227
released
FAIRE-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male (53 years)
Lab:
AMP-T2D consortium
Project:
AMP