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Schema
Citing CMDGA
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Assay category
2
DNA binding
Assay
2
ChIP-seq
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
16
hg19
GRCh38
Organism
2
Homo sapiens
Target of assay
1
RNA binding protein
1
control
1
transcription factor
Biosample type
1
cell line
1
primary cell
Organ
1
liver
Life stage
1
child
1
unknown
Available data
2
bam
2
bigWig
2
fastq
1
bed broadPeak
1
bed narrowPeak
1
bigBed broadPeak
1
bigBed narrowPeak
1
tagAlign
Platform
83
Illumina HiSeq 2000
40
Illumina Genome Analyzer IIx
33
Illumina Genome Analyzer
19
Illumina HiSeq 2500
18
Illumina HiSeq 4000
10
Illumina Genome Analyzer II
2
HiSeq 1500
2
Illumina Genome Analyzer IIe
1
Applied Biosystems SOLiD System 3 Plus
1
MiSeq
Run type
2
single-ended
Read length (nt)
2
36
Library made from
2
DNA
Date released
1
August, 2017
1
November, 2017
Lab
2
AMP-T2D consortium
Replication type
2
isogenic
assembly!
GRCh38
Showing 2 of 2 results
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Experiment
TSTSR097481
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR132965
released
ChIP-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast male (22 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP