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Schema
Citing CMDGA
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Assay category
4
3D chromatin structure
Assay
66
ChIP-seq
16
ATAC-seq
14
total RNA-seq
4
Hi-C
4
pCHi-C
2
DNase-seq
1
FAIRE-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
5
hg19
GRCh38
Organism
4
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
primary cell
1
tissue
Organ
1
blood vessel
1
epithelium
1
heart
1
vasculature
1
vein
Life stage
3
unknown
1
embryonic
Available data
4
hic
3
bedpe bed3+
Library made from
4
DNA
Date released
10
March, 2020
8
July, 2019
4
October, 2019
3
August, 2021
3
October, 2022
2
November, 2019
1
December, 2018
1
March, 2019
Lab
4
AMP-T2D consortium
Replication type
2
isogenic
1
anisogenic
1
unreplicated
Audit category:
2
inconsistent ontology term
1
audit script error
assembly!
GRCh38
Showing 4 of 4 results
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Experiment
DSR786VPZ
released
Hi-C
of heart
Homo sapiens
heart embryo (57 days) and embryo (67 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR464RKE
released
Audit error
1
Hi-C
of cardiac precursors (cardiac muscle cell)
Homo sapiens
cardiac precursors (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR235SPD
released
Audit error
1
Hi-C
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR251SCT
released
Audit error
1
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP