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Schema
Citing CMDGA
Clear Filters
Assay category
6
DNA binding
Assay
6
ChIP-seq
1
Hi-C
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
48
hg19
GRCh38
Organism
6
Homo sapiens
Target of assay
4
control
2
chromatin remodeller
2
transcription factor
1
RNA binding protein
Biosample type
6
cell line
Organ
6
liver
Life stage
6
child
Available data
6
bam
6
fastq
2
bed narrowPeak
2
bigBed narrowPeak
2
bigWig
Platform
3
Illumina HiSeq 2000
2
Illumina HiSeq 2500
1
Illumina HiSeq 4000
Run type
93
single-ended
6
paired-ended
Read length (nt)
4
100
2
25
2
36
Library made from
6
DNA
Date released
6
November, 2017
Lab
6
AMP-T2D consortium
Replication type
6
isogenic
Audit category:
2
missing controlled_by
Audit category:
2
inconsistent control run_type
1
inconsistent control read length
assembly!
GRCh38
Showing 6 of 6 results
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Experiment
TSTSR746922
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR315987
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
rabbit-IgG-control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR141124
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR827394
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR369214
released
Audit not_compliant
1
Audit warning
1
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
NCOR1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR998180
released
Audit not_compliant
1
Audit warning
2
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
CHD4
Lab:
AMP-T2D consortium
Project:
AMP