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Schema
Citing CMDGA
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Assay category
2
DNA binding
Assay
2
ChIP-seq
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
16
hg19
GRCh38
Organism
2
Homo sapiens
Target of assay
1
RNA binding protein
1
control
1
transcription factor
Biosample type
1
cell line
1
primary cell
Organ
1
liver
Life stage
1
child
1
unknown
Available data
2
bam
2
bigWig
2
fastq
1
bed broadPeak
1
bed narrowPeak
1
bigBed broadPeak
1
bigBed narrowPeak
1
tagAlign
Platform
218
Illumina NovaSeq 6000
80
Illumina HiSeq 2000
80
Illumina HiSeq 4000
45
Illumina Genome Analyzer IIx
38
HiSeq HighOutput V4
33
Illumina Genome Analyzer
28
Illumina HiSeq 2500
11
Illumina Genome Analyzer II
2
HiSeq 1500
2
Illumina Genome Analyzer IIe
1
Applied Biosystems SOLiD System 3 Plus
1
Illumina Genome Analyzer I
1
MiSeq
Run type
2
single-ended
Read length (nt)
2
36
Library made from
2
DNA
Date released
1
August, 2017
1
November, 2017
Lab
2
AMP-T2D consortium
Replication type
2
isogenic
assembly!
GRCh38
month_released!
November, 2018
Showing 2 of 2 results
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Experiment
TSTSR097481
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR132965
released
ChIP-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast male (22 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP