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Citing CMDGA
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Assay category
5
DNA binding
Assay
5
ChIP-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Target of assay
2
histone
2
histone modification
2
transcription factor
1
broad histone mark
1
control
1
narrow histone mark
Biosample type
5
in vitro differentiated cells
Life stage
5
unknown
Available data
5
bam
5
fastq
4
bed narrowPeak
4
bigWig
3
bed bed3+
Platform
5
Illumina HiSeq 2500
Run type
5
single-ended
Read length (nt)
4
36
2
50
Library made from
5
DNA
Date released
5
December, 2017
3
February, 2018
Lab
5
AMP-T2D consortium
Replication type
3
isogenic
2
unreplicated
Audit category:
2
inconsistent control read length
assembly!
hg18
month_released!
September, 2020
Showing 5 of 5 results
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Experiment
TSTSR782922
released
Audit warning
1
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
H3K4me1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR568152
released
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR102106
released
Audit warning
1
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
FOXA2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR043278
released
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
FOXA1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR543637
released
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP