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Citing CMDGA
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Assay category
2
DNA methylation
1
DNA sequencing
Assay
564
ChIP-seq
270
ATAC-seq
263
single cell RNA-seq
248
total RNA-seq
87
RNA microarray
83
snATAC-seq
75
WGBS
53
pCHi-C
26
DNase-seq
10
MeRIP-seq
7
Hi-C
5
GRO-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
HiChIP
2
RRBS
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
3
AMP
RFA
2
AMP
1
AMP2
Experiment status
3
released
Genome assembly (visualization)
hg19
Organism
3
Homo sapiens
Biosample type
2
tissue
1
cell line
Organ
2
musculature of body
1
liver
Life stage
2
adult
1
unknown
Available data
1
vcf
Library made from
3
DNA
Date released
2
August, 2017
1
August, 2021
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Replication type
3
unreplicated
assembly!
hg19
month_released!
November, 2019
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Experiment
DSR246XUG
released
whole genome sequencing assay
of HepG2
Homo sapiens
HepG2
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
TSTSR698044
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue female adult (72 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR637767
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP