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Citing CMDGA
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Assay category
3
DNA accessibility
Assay
360
ChIP-seq
159
total RNA-seq
5
DNase-seq
3
ATAC-seq
3
small RNA-seq
1
WGBS
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
23
hg19
3
GRCh38
Organism
3
Homo sapiens
Biosample type
1
cell line
1
primary cell
1
tissue
Organ
75
kidney
59
pancreas
47
heart
46
blood vessel
46
vasculature
45
artery
34
epithelium
8
bone element
8
limb
8
skeleton
5
connective tissue
3
adipose tissue
3
liver
2
brain
1
nerve
1
spleen
Life stage
2
adult
1
embryonic
Available data
3
bam
3
bed narrowPeak
1
bed bed3
1
bigBed narrowPeak
1
bigWig
1
fastq
Platform
1
Illumina HiSeq 4000
Run type
1
paired-ended
Read length (nt)
1
100
Library insert size (nt)
1
150-250
Library made from
3
DNA
Date released
1
August, 2017
1
February, 2021
1
October, 2019
Lab
3
AMP-T2D consortium
Replication type
2
unreplicated
1
isogenic
Audit category:
1
inconsistent ontology term
1
inconsistent replicate
Showing 3 of 3 results
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Experiment
DSR057RCG
released
Audit error
1
ATAC-seq
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR093FMP
released
Audit error
1
ATAC-seq
of Liver fetal (hepatocyte)
Homo sapiens
Liver fetal (hepatocyte) female embryo (76 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR622315
released
ATAC-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP