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Citing CMDGA
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Assay category
2
DNA accessibility
Assay
1283
total RNA-seq
1190
ChIP-seq
233
ATAC-seq
100
single cell RNA-seq
18
small RNA-seq
17
WGBS
5
GRO-seq
2
DNase-seq
2
Hi-C
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
3
hg19
2
GRCh38
0
hg18
Organism
2
Homo sapiens
Biosample type
1
cell line
1
tissue
Organ
1
epithelium
1
kidney
1
pancreas
Life stage
1
child
1
unknown
Available data
207
bam
207
bed narrowPeak
207
bigBed narrowPeak
207
bigWig
bed broadPeak
205
bigBed broadPeak
204
bed bed3+
11
fastq
Platform
1
Illumina Genome Analyzer
Run type
1
single-ended
Read length (nt)
1
20
Library made from
2
DNA
Date released
1
August, 2017
1
October, 2019
Lab
2
AMP-T2D consortium
Replication type
1
anisogenic
1
isogenic
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bed broadPeak
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Experiment
DSR366LGT
released
DNase-seq
of glomerular visceral epithelial cell
Homo sapiens
glomerular visceral epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR171380
released
DNase-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans
Lab:
AMP-T2D consortium
Project:
AMP