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Citing CMDGA
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Assay category
5
DNA accessibility
Assay
173
ChIP-seq
89
total RNA-seq
5
ATAC-seq
4
DNase-seq
4
RRBS
1
FAIRE-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Biosample type
3
primary cell
2
tissue
Organ
3
epithelium
3
pancreas
1
adipose tissue
1
connective tissue
1
liver
Life stage
4
adult
1
unknown
Available data
5
bam
5
bed narrowPeak
5
bigBed narrowPeak
5
bigWig
5
fastq
Platform
3
Illumina NextSeq 500
2
Illumina HiSeq 4000
Run type
5
paired-ended
Read length (nt)
3
41
3
50
2
100
Library insert size (nt)
1
150-250
Library made from
5
DNA
Date released
45
February, 2023
45
May, 2020
38
May, 2022
26
November, 2019
22
February, 2021
18
May, 2021
14
September, 2018
12
August, 2021
9
October, 2019
7
October, 2017
5
August, 2017
5
July, 2019
5
September, 2017
4
March, 2020
3
January, 2018
2
March, 2019
1
November, 2020
Lab
5
AMP-T2D consortium
Replication type
5
unreplicated
Showing 5 of 5 results
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Experiment
TSTSR560092
released
ATAC-seq
of subcutaneous adipose tissue
Homo sapiens
subcutaneous adipose tissue female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR622315
released
ATAC-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR318132
released
ATAC-seq
of pancreatic acinar cell
Homo sapiens
pancreatic acinar cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR066676
released
ATAC-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell male adult (38 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR371317
released
ATAC-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male adult (38 years)
Lab:
AMP-T2D consortium
Project:
AMP