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Citing CMDGA
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Assay category
4
DNA binding
Assay
4
ChIP-seq
2
DNase-seq
1
RRBS
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Target of assay
3
transcription factor
1
RNA binding protein
1
histone
1
histone modification
1
narrow histone mark
Biosample type
4
tissue
Organ
4
liver
Life stage
3
adult
2
child
1
unknown
Available data
4
bam
4
bed narrowPeak
4
bigWig
4
fastq
3
bigBed narrowPeak
1
bed bed3+
Platform
2
Illumina Genome Analyzer IIx
1
Illumina Genome Analyzer II
1
Illumina HiSeq 2500
Run type
4
single-ended
Read length (nt)
36
50
6
33
4
36
3
200
2
32
Mapped read length (nt)
1
36
Library made from
4
DNA
Date released
2
August, 2017
2
December, 2017
Lab
4
AMP-T2D consortium
Replication type
3
anisogenic
1
unreplicated
Audit category:
1
inconsistent control read length
files.read_length!
32
Showing 4 of 4 results
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Experiment
TSTSR981226
released
ChIP-seq
of liver
Homo sapiens
liver female child (6 years) and male adult (32 years)
Target:
RAD21
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR296175
released
ChIP-seq
of liver
Homo sapiens
liver female child (6 years) and male adult (32 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR629646
released
ChIP-seq
of liver
Homo sapiens
liver
Target:
FOXA2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR999552
released
Audit warning
1
ChIP-seq
of liver
Homo sapiens
liver male adult (32 years)
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP