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Citing CMDGA
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Assay category
3
DNA binding
Assay
3
ChIP-seq
2
total RNA-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Target of assay
histone
4
histone modification
2
broad histone mark
2
narrow histone mark
2
transcription factor
1
control
Biosample type
3
in vitro differentiated cells
Life stage
3
unknown
Available data
3
bam
3
fastq
2
bed narrowPeak
2
bigWig
1
bed bed3+
Platform
3
Illumina HiSeq 2500
Run type
3
single-ended
Read length (nt)
2
36
1
50
Library made from
3
DNA
Date released
3
December, 2017
Lab
3
AMP-T2D consortium
Replication type
2
unreplicated
1
isogenic
Audit category:
1
inconsistent control read length
target.investigated_as!
histone
Showing 3 of 3 results
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Experiment
TSTSR102106
released
Audit warning
1
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
FOXA2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR043278
released
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
FOXA1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR543637
released
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP