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Assay category
4
DNA binding
2
DNA accessibility
1
Transcription
Assay
4
ChIP-seq
1
ATAC-seq
1
DNase-seq
1
small RNA-seq
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
5
GRCh38
3
hg19
Organism
7
Homo sapiens
Target of assay
2
control
2
histone
2
histone modification
2
narrow histone mark
Biosample type
7
tissue
Organ
7
brain
Life stage
6
adult
1
embryonic
Available data
7
bam
5
bigWig
3
bed narrowPeak
2
bigBed narrowPeak
2
tagAlign
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
fastq
1
tsv
Platform
1
Illumina HiSeq 2500
Run type
1
single-ended
Read length (nt)
1
50
Library made from
6
DNA
1
RNA
Date released
2
November, 2017
2
October, 2019
1
July, 2019
1
June, 2019
1
October, 2017
Lab
7
AMP-T2D consortium
Replication type
4
unreplicated
3
anisogenic
Audit category:
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Showing 7 of 7 results
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Experiment
DSR870ODH
released
ChIP-seq
of cerebellum (Hemisphere)
Homo sapiens
cerebellum female adult (50 years) and female adult (68 years) and female adult (90 years)
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR442VBO
released
ChIP-seq
of cerebellum (Hemisphere)
Homo sapiens
cerebellum female adult (68 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR820JIZ
released
small RNA-seq
of cerebellum (Hemisphere)
Homo sapiens
cerebellum female embryo (19 weeks) and female embryo (37 weeks)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR718VJF
released
DNase-seq
of cerebellum (Hemisphere)
Homo sapiens
cerebellum male adult (27 years) and male adult (35 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR520516
released
ChIP-seq
of cerebellum (Hemisphere)
Homo sapiens
cerebellum male adult (53 years)
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR130840
released
ChIP-seq
of cerebellum (Hemisphere)
Homo sapiens
cerebellum male adult (53 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR656713
released
ATAC-seq
of cerebellum (Hemisphere)
Homo sapiens
cerebellum male adult (20 years)
Lab:
AMP-T2D consortium
Project:
AMP