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Assay
1812
ChIP-seq
1397
total RNA-seq
489
ATAC-seq
360
single cell RNA-seq
208
DNase-seq
84
snATAC-seq
75
WGBS
48
pCHi-C
29
Hi-C
19
RRBS
18
small RNA-seq
5
FAIRE-seq
5
GRO-seq
4
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
RNA microarray
3
snDrop-seq
2
Capture-C
2
HiChIP
2
MeRIP-seq
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
siRNA RNA-seq
1
whole genome sequencing assay
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Organism
2
Homo sapiens
Biosample type
3
tissue
Organ
2
kidney
1
adipose tissue
1
connective tissue
1
epithelium
Life stage
2
unknown
Available data
2
tsv
Library made from
2
RNA
Date released
2
December, 2019
1
August, 2021
Lab
3
AMP-T2D consortium
Replication type
3
unreplicated
Audit category:
inconsistent ontology term
2
audit script error
audit.ERROR.category!
inconsistent ontology term
target.investigated_as!
nucleotide modification
assay_title!
siRNA RNA-seq
Showing 3 of 3 results
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Experiment
DSR795DZU
released
RNA microarray
of subcutaneous adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR479AEW
released
Audit error
1
RNA microarray
of kidney interstitium
Homo sapiens
kidney interstitium
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR187TER
released
Audit error
1
RNA microarray
of renal glomerulus
Homo sapiens
renal glomerulus
Lab:
AMP-T2D consortium
Project:
AMP