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Citing CMDGA
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Assay category
1
3D chromatin structure
1
DNA accessibility
Assay
290
total RNA-seq
69
ChIP-seq
55
ATAC-seq
4
MeRIP-seq
4
pCHi-C
1
DNase-seq
1
FAIRE-seq
1
Hi-C
1
RRBS
1
snATAC-seq
Project
2
AMP
RFA
2
AMP
2
AMP2
Experiment status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
tissue
Organ
2
pancreas
Life stage
1
adult
1
unknown
Available data
1
bam
1
bed narrowPeak
1
bedpe bed3+
1
bigBed narrowPeak
1
bigWig
1
fastq
1
hic
Platform
1
Illumina Genome Analyzer
Run type
1
single-ended
Read length (nt)
1
20
Library made from
2
DNA
Date released
1
August, 2017
1
November, 2019
Lab
2
AMP-T2D consortium
Replication type
1
anisogenic
1
unreplicated
audit.ERROR.category!
inconsistent replicate
Showing 2 of 2 results
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Experiment
DSR951IJE
released
Hi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (43 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR171380
released
DNase-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans
Lab:
AMP-T2D consortium
Project:
AMP