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Schema
Citing CMDGA
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Assay category
4
DNA accessibility
2
DNA methylation
Assay
130
total RNA-seq
84
RNA microarray
59
ChIP-seq
42
ATAC-seq
9
pCHi-C
9
single cell RNA-seq
6
MeRIP-seq
5
Hi-C
4
DNase-seq
2
Capture-C
2
RRBS
1
STARR-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
hg19
4
GRCh38
Organism
6
Homo sapiens
Biosample type
5
primary cell
1
tissue
Organ
2
connective tissue
2
epithelium
2
heart
2
kidney
1
limb
1
musculature of body
1
vasculature
Life stage
5
unknown
1
embryonic
Available data
4
bam
4
bed bed3+
4
bed broadPeak
4
bed narrowPeak
4
bigBed broadPeak
4
bigBed narrowPeak
4
bigWig
2
bed bedMethyl
2
bigBed bedMethyl
Library made from
6
DNA
Date released
4
June, 2019
2
July, 2019
Lab
6
AMP-T2D consortium
Replication type
5
isogenic
1
unreplicated
Audit category:
6
inconsistent ontology term
Showing 6 of 6 results
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Experiment
DSR253RYM
released
Audit error
1
RRBS
of cardiac fibroblast
Homo sapiens
cardiac fibroblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR682FAB
released
Audit error
1
RRBS
of epithelial cell of proximal tubule
Homo sapiens
epithelial cell of proximal tubule
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR027ICT
released
Audit error
1
DNase-seq
of muscle of leg
Homo sapiens
muscle of leg female embryo (115 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR645FWC
released
Audit error
1
DNase-seq
of epithelial cell of proximal tubule
Homo sapiens
epithelial cell of proximal tubule
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR712MHV
released
Audit error
1
DNase-seq
of cardiac fibroblast
Homo sapiens
cardiac fibroblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR678DGR
released
Audit error
1
DNase-seq
of smooth muscle cell of the brain vasculature
Homo sapiens
smooth muscle cell of the brain vasculature female
Lab:
AMP-T2D consortium
Project:
AMP