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Assay category
3
Transcription
Assay
130
total RNA-seq
84
RNA microarray
55
ChIP-seq
42
ATAC-seq
9
pCHi-C
6
MeRIP-seq
5
Hi-C
4
DNase-seq
3
single cell RNA-seq
2
Capture-C
2
RRBS
1
STARR-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
3
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
primary cell
Life stage
2
unknown
1
adult
Available data
3
tsv
1
bam
1
bigWig
1
fastq
Platform
1
Illumina HiSeq 2000
Run type
1
single-ended
Read length (nt)
1
43
Library insert size (nt)
1
>100
Library made from
3
RNA
Date released
July, 2018
2
December, 2019
1
June, 2018
Lab
3
AMP-T2D consortium
Replication type
2
isogenic
1
unreplicated
Audit category:
7
audit script error
3
inconsistent ontology term
month_released!
December, 2017
July, 2018
Showing 3 of 3 results
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Experiment
DSR690SBQ
released
Audit error
2
single cell RNA-seq
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR054HMA
released
Audit error
2
single cell RNA-seq
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR824095
released
Audit error
1
single cell RNA-seq
of unclassified exocrine cell
Homo sapiens
unclassified exocrine cell male adult (57 years)
Lab:
AMP-T2D consortium
Project:
AMP