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Schema
Citing CMDGA
Clear Filters
Assay category
5
DNA accessibility
Assay
675
ChIP-seq
59
single cell RNA-seq
59
total RNA-seq
27
snATAC-seq
9
DNase-seq
7
WGBS
5
ATAC-seq
5
GRO-seq
4
RRBS
1
Hi-C
1
pCHi-C
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
5
GRCh38
4
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Organ
pancreas
32
epithelium
2
adipose tissue
2
connective tissue
1
brain
1
liver
1
spleen
Life stage
5
adult
Available data
214
bed narrowPeak
110
bam
95
bigWig
64
xls
12
bed bed3
12
tsv
7
bed bedgraph
5
bigBed narrowPeak
5
fastq
4
bed bed3+
3
txt
Platform
4
Illumina HiSeq 4000
1
Illumina HiSeq 2500
Run type
4
paired-ended
1
single-ended
Read length (nt)
4
100
1
50
Library insert size (nt)
1
150-250
Library made from
5
DNA
Date released
3
October, 2017
2
August, 2017
Lab
5
AMP-T2D consortium
Replication type
5
unreplicated
audit.NOT_COMPLIANT.category!
missing controlled_by
organ_slims!
pancreas
Showing 5 of 5 results
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Experiment
TSTSR656713
released
ATAC-seq
of cerebellum (Hemisphere)
Homo sapiens
cerebellum male adult (20 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR914451
released
ATAC-seq
of omental fat pad
Homo sapiens
omental fat pad female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR728326
released
ATAC-seq
of spleen
Homo sapiens
spleen female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR560092
released
ATAC-seq
of subcutaneous adipose tissue
Homo sapiens
subcutaneous adipose tissue female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR622315
released
ATAC-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP