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Assay category
1
DNA sequencing
Assay
1782
ChIP-seq
1527
total RNA-seq
531
ATAC-seq
369
single cell RNA-seq
212
DNase-seq
87
RNA microarray
84
snATAC-seq
75
WGBS
57
pCHi-C
34
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
2
T1D
1
AMP
RFA
2
T1D
1
AMP2
Experiment status
3
released
Organism
3
Homo sapiens
Biosample type
3
cell line
Organ
1
liver
Life stage
3
unknown
Available data
1
vcf
Library made from
3
DNA
Date released
2
February, 2023
1
August, 2021
Lab
2
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Replication type
3
unreplicated
audit.NOT_COMPLIANT.category!
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Experiment
DSR498QQL
released
HiChIP
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR895OVT
released
HiChIP
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR246XUG
released
whole genome sequencing assay
of HepG2
Homo sapiens
HepG2
Lab:
Bing Ren, UCSD
Project:
AMP