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Citing CMDGA
Clear Filters
Assay category
3
DNA binding
Assay
3
ChIP-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Organism
3
Homo sapiens
Target of assay
2
histone
2
histone modification
1
broad histone mark
1
narrow histone mark
1
recombinant protein
1
transcription factor
Biosample type
1
cell line
1
in vitro differentiated cells
1
tissue
Organ
1
brain
1
embryo
1
liver
Life stage
1
child
1
embryonic
1
unknown
Available data
89
fastq
88
bam
bigWig
48
bed narrowPeak
15
bigBed narrowPeak
14
bed bed3+
4
tagAlign
2
bed broadPeak
Platform
1
Illumina Genome Analyzer II
1
Illumina HiSeq 2000
1
Illumina HiSeq 2500
Run type
3
single-ended
Read length (nt)
2
36
1
76
Library made from
3
DNA
Date released
1
December, 2017
1
November, 2018
1
October, 2017
Lab
3
AMP-T2D consortium
Replication type
3
unreplicated
Audit category:
3
missing controlled_by
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bigWig
Showing 3 of 3 results
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Experiment
TSTSR301THR
released
Audit not_compliant
1
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
FLAG-PHF5A
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR020690
released
Audit not_compliant
1
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR793865
released
Audit not_compliant
1
ChIP-seq
of brain
Homo sapiens
brain male embryo (122 days)
Target:
H3K9me3
Lab:
AMP-T2D consortium
Project:
AMP