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Schema
Citing CMDGA
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Assay category
2
DNA binding
Assay
2
ChIP-seq
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Target of assay
1
RNA binding protein
1
control
1
transcription factor
Biosample type
2
cell line
Organ
2
liver
Life stage
2
child
Available data
2
bam
2
bigWig
2
fastq
1
bed broadPeak
1
bed narrowPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Platform
199
Illumina HiSeq 2000
53
Illumina Genome Analyzer IIx
51
Illumina Genome Analyzer
28
Illumina HiSeq 2500
11
Illumina HiSeq 4000
2
Illumina Genome Analyzer II
1
Illumina Genome Analyzer I
1
Illumina Genome Analyzer IIe
Run type
2
single-ended
Read length (nt)
1
32
1
36
Library made from
2
DNA
Date released
2
November, 2017
Lab
2
AMP-T2D consortium
Replication type
1
isogenic
1
unreplicated
Audit category:
inconsistent control read length
audit.WARNING.category!
inconsistent control read length
Showing 2 of 2 results
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Experiment
TSTSR271600
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR986322
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP