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Assay category
4
DNA binding
Assay
4
ChIP-seq
2
total RNA-seq
1
GRO-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
4
Homo sapiens
Target of assay
2
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Biosample type
4
in vitro differentiated cells
0
primary cell
0
tissue
Life stage
3
unknown
1
embryonic
Available data
4
bam
4
fastq
2
bed bed3+
2
bed narrowPeak
2
bigWig
Platform
3
Illumina HiSeq 2500
1
Illumina Genome Analyzer IIx
Run type
4
single-ended
Read length (nt)
4
36
Library made from
4
DNA
Date released
3
December, 2017
1
February, 2018
Lab
4
AMP-T2D consortium
Replication type
2
isogenic
2
unreplicated
Audit category:
inconsistent control read length
audit.WARNING.category!
inconsistent control read length
Showing 4 of 4 results
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Experiment
TSTSR282245
released
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR568152
released
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR043278
released
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
FOXA1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR543637
released
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP