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Citing CMDGA
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Assay category
1
3D chromatin structure
1
DNA binding
Assay
1
ChIP-seq
1
Hi-C
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
1
Homo sapiens
Target of assay
1
broad histone mark
1
histone
1
histone modification
Biosample type
primary cell
1
cell line
1
tissue
Organ
2
pancreas
Life stage
1
adult
Available data
2
bigWig
1
bam
1
bed bed3+
1
bed broadPeak
1
bed narrowPeak
1
bigBed narrowPeak
1
fastq
1
hdf5
1
tagAlign
Platform
1
Illumina HiSeq 2000
Run type
1
single-ended
Read length (nt)
1
36
Library made from
1
DNA
Date released
1
August, 2017
1
October, 2019
Lab
2
AMP-T2D consortium
Replication type
1
isogenic
1
unreplicated
Audit category:
51
inconsistent control read length
8
inconsistent control run_type
2
inconsistent assembly
biosample_type!
primary cell
Showing 2 of 2 results
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Experiment
DSR617LKP
released
Audit warning
1
Hi-C
of Panc1
Homo sapiens
Panc1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR676937
released
Audit warning
1
ChIP-seq
of pancreas
Target:
H3K36me3
Lab:
AMP-T2D consortium
Project:
AMP