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Citing CMDGA
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Assay category
5
DNA binding
Assay
5
ChIP-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Target of assay
5
histone
5
histone modification
5
narrow histone mark
Biosample type
26
cell line
17
in vitro differentiated cells
6
tissue
5
primary cell
2
stem cell
Organ
4
epithelium
4
pancreas
Life stage
5
unknown
Available data
5
bam
5
bed narrowPeak
5
bigWig
5
fastq
1
bigBed narrowPeak
Platform
4
Illumina Genome Analyzer IIx
1
Illumina HiSeq 2000
Run type
5
single-ended
1
paired-ended
Read length (nt)
4
44
1
36
1
76
Library made from
5
DNA
Date released
5
August, 2017
Lab
5
AMP-T2D consortium
Replication type
4
unreplicated
1
isogenic
Audit category:
5
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
Showing 5 of 5 results
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Experiment
TSTSR247243
released
Audit warning
1
ChIP-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR978899
released
Audit warning
1
ChIP-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR422389
released
Audit warning
1
ChIP-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR888854
released
Audit warning
1
ChIP-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR410352
released
Audit warning
3
ChIP-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast male (22 years)
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP