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Citing CMDGA
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Assay category
3
DNA accessibility
Assay
10
single cell RNA-seq
5
total RNA-seq
3
ATAC-seq
Project
HPAP
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Organ
3
epithelium
3
pancreas
Life stage
3
adult
2
child
2
unknown
Available data
3
bam
3
bed narrowPeak
3
bigBed narrowPeak
3
bigWig
3
fastq
Platform
2
Illumina HiSeq 2000
1
Illumina NextSeq 500
Run type
3
paired-ended
Read length (nt)
2
102
1
41
1
50
Library made from
3
DNA
Date released
2
September, 2018
1
August, 2017
Lab
3
AMP-T2D consortium
Replication type
3
unreplicated
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HPAP
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Experiment
TSTSR777UBU
released
ATAC-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell male adult (19 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR530BOP
released
ATAC-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell male adult (20 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR066676
released
ATAC-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell male adult (38 years)
Lab:
AMP-T2D consortium
Project:
AMP