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Assay
1819
ChIP-seq
1467
total RNA-seq
456
ATAC-seq
305
single cell RNA-seq
131
DNase-seq
85
RNA microarray
78
snATAC-seq
75
WGBS
55
pCHi-C
33
Hi-C
17
RRBS
17
small RNA-seq
10
MeRIP-seq
5
GRO-seq
4
Capture-C
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
STARR-seq
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
1
whole genome sequencing assay
Project
3
AMP
2
T1D
RFA
3
AMP2
2
T1D
Experiment status
5
released
Organism
5
Homo sapiens
Biosample type
5
cell line
Organ
kidney
2
liver
Life stage
5
unknown
Library made from
3
RNA
2
DNA
Date released
3
August, 2021
2
February, 2023
Lab
3
Bing Ren, UCSD
2
Kyle Gaulton, UCSD
Replication type
3
unreplicated
2
isogenic
Audit category:
1
inconsistent ontology term
award.project!
community
organ_slims!
kidney
Showing 5 of 5 results
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Experiment
DSR498QQL
released
HiChIP
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR895OVT
released
HiChIP
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR433YZO
released
Audit error
1
STARR-seq
of Synthesized DNA
Homo sapiens
Synthesized DNA
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR661CGV
released
STARR-seq
of HepG2
Homo sapiens
HepG2
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR594DXF
released
STARR-seq
of HepG2
Homo sapiens
HepG2
Lab:
Bing Ren, UCSD
Project:
AMP