Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay category
4
DNA accessibility
Assay
1575
ChIP-seq
1444
total RNA-seq
526
ATAC-seq
363
single cell RNA-seq
207
DNase-seq
87
RNA microarray
84
snATAC-seq
66
WGBS
57
pCHi-C
34
Hi-C
18
small RNA-seq
15
RRBS
10
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
1
whole genome sequencing assay
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
4
hg19
Organism
7
Homo sapiens
Biosample type
6
tissue
1
primary cell
Organ
4
kidney
1
blood vessel
1
brain
1
epithelium
1
pancreas
1
vasculature
1
vein
Life stage
6
adult
1
newborn
1
unknown
Available data
4
bam
4
bed narrowPeak
4
bigBed narrowPeak
4
bigWig
3
tsv
1
fastq
1
tar
Platform
1
Illumina Genome Analyzer I
Run type
1
single-ended
Read length (nt)
1
50
Library made from
4
DNA
3
RNA
Date released
3
February, 2021
2
July, 2019
August, 2017
1
November, 2018
1
October, 2019
Lab
7
AMP-T2D consortium
Replication type
5
anisogenic
1
isogenic
1
unreplicated
award.project!
community
month_released!
August, 2017
Showing 7 of 7 results
table-tab-icon
matrix-icon
Download
Experiment
DSR983MYO
released
snDrop-seq
of kidney (medulla)
Homo sapiens
kidney male adult
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR718NCQ
released
snDrop-seq
of kidney (Cortex-Medulla)
Homo sapiens
kidney male adult
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR684WPX
released
snDrop-seq
of kidney (cortex)
Homo sapiens
kidney NONE and female adult and male adult
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR024UHG
released
FAIRE-seq
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein newborn
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR821PLA
released
FAIRE-seq
of kidney
Homo sapiens
kidney female adult (30 years) and male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR405QWU
released
FAIRE-seq
of frontal cortex
Homo sapiens
frontal cortex female adult (67 years) and female adult (80 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR803CTG
released
FAIRE-seq
of pancreas
Homo sapiens
pancreas adult (54 years) and adult (60 years)
Lab:
AMP-T2D consortium
Project:
AMP