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Assay category
1
DNA accessibility
1
DNA binding
1
DNA methylation
1
Transcription
Assay
1
ATAC-seq
1
ChIP-seq
1
WGBS
1
pCHi-C
1
total RNA-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
5
Homo sapiens
Target of assay
1
control
Biosample type
5
tissue
Organ
5
adipose tissue
5
connective tissue
Life stage
3
adult
2
unknown
Available data
bigWig
385
bam
382
tsv
5
fastq
2
bed bedMethyl
2
bed narrowPeak
2
bigBed bedMethyl
2
bigBed narrowPeak
Platform
1
Illumina HiSeq 2000
1
Illumina HiSeq 2500
Run type
2
single-ended
Read length (nt)
1
36
1
100
Mapped read length (nt)
1
36
Library made from
4
DNA
1
RNA
Date released
2
August, 2017
1
February, 2023
1
March, 2020
1
May, 2023
Lab
5
AMP-T2D consortium
Replication type
3
unreplicated
2
anisogenic
award.project!
community
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small intestine
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bigWig
Showing 5 of 5 results
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Experiment
DSR512DPA
released
ATAC-seq
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR720HHB
released
total RNA-seq
of adipose tissue
Homo sapiens
adipose tissue female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR437GEP
released
pCHi-C
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR430639
released
WGBS
of adipose tissue
Homo sapiens
adipose tissue male adult (34 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR560677
released
ChIP-seq
of adipose tissue
Homo sapiens
adipose tissue male adult (34 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP