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Schema
Citing CMDGA
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Assay category
2
DNA binding
Assay
2
ChIP-seq
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Target of assay
1
RNA binding protein
1
broad histone mark
1
histone
1
histone modification
1
transcription factor
Biosample type
2
cell line
Organ
2
liver
Life stage
2
child
Available data
3
bam
3
bigWig
3
fastq
2
bed broadPeak
2
bed narrowPeak
2
bigBed broadPeak
2
bigBed narrowPeak
1
tagAlign
Platform
157
Illumina HiSeq 2000
53
Illumina Genome Analyzer IIx
44
Illumina Genome Analyzer
34
Illumina HiSeq 2500
10
Illumina HiSeq 4000
7
Illumina Genome Analyzer IIe
2
Illumina Genome Analyzer II
1
Illumina Genome Analyzer I
Run type
2
single-ended
Read length (nt)
2
36
Library made from
2
DNA
Date released
2
November, 2017
Lab
2
AMP-T2D consortium
Replication type
2
isogenic
Audit category:
1
inconsistent control read length
assay_title!
Hi-C
Showing 2 of 2 results
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Experiment
TSTSR762932
released
Audit warning
1
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
H3K27me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR271600
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP