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Citing CMDGA
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Assay category
6
DNA binding
Assay
6
ChIP-seq
1
ATAC-seq
1
Capture-C
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
GRCh38
6
hg19
Organism
6
Homo sapiens
Target of assay
5
transcription factor
1
control
Biosample type
6
in vitro differentiated cells
Organ
6
connective tissue
Life stage
6
unknown
Available data
6
bam
6
bed bed3+
6
fastq
5
bed narrowPeak
5
bigWig
Platform
3
HiSeq 1500
2
Illumina HiSeq 2000
1
Illumina Genome Analyzer II
Run type
6
single-ended
Read length (nt)
3
50
2
37
2
40
1
38
1
67
Library made from
6
DNA
Date released
6
August, 2017
Lab
6
AMP-T2D consortium
Replication type
6
anisogenic
Audit category:
3
inconsistent control read length
replication_type!
unreplicated
files.read_length!
67
Showing 6 of 6 results
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Experiment
TSTSR155609
released
Audit warning
1
ChIP-seq
of adipocyte
Homo sapiens
adipocyte
Target:
MED1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR204006
released
Audit warning
1
ChIP-seq
of adipocyte
Homo sapiens
adipocyte
Target:
RELA
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR678966
released
Audit warning
1
ChIP-seq
of adipocyte
Homo sapiens
adipocyte
Target:
MED1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR812164
released
ChIP-seq
of adipocyte
Homo sapiens
adipocyte
Target:
EBF1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR465195
released
ChIP-seq
of adipocyte
Homo sapiens
adipocyte
Target:
rabbit-IgG-control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR080417
released
ChIP-seq
of adipocyte
Homo sapiens
adipocyte
Target:
PPARG
Lab:
AMP-T2D consortium
Project:
AMP