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Citing CMDGA
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Assay category
3
DNA binding
Assay
3
ChIP-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Target of assay
2
transcription factor
1
histone
1
histone modification
1
narrow histone mark
Biosample type
3
tissue
Organ
3
pancreas
Life stage
3
unknown
Available data
3
bam
3
bed bed3+
3
bigWig
3
fastq
Platform
Illumina Genome Analyzer IIx
3
Illumina HiSeq 2000
Run type
3
single-ended
Read length (nt)
17
36
5
49
3
51
2
50
Library made from
3
DNA
Date released
3
August, 2017
Lab
3
AMP-T2D consortium
Replication type
3
anisogenic
Audit category:
3
missing controlled_by
files.platform.term_name!
Illumina Genome Analyzer IIx
Showing 3 of 3 results
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Experiment
TSTSR903829
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female (38 years) and male (38 years)
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR003436
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female (38 years) and male (38 years)
Target:
PDX1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR644140
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male (34 years) and male (38 years)
Target:
FOXA2
Lab:
AMP-T2D consortium
Project:
AMP