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Citing CMDGA
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Assay category
2
DNA binding
1
DNA accessibility
Assay
2
ChIP-seq
1
ATAC-seq
Project
2
T1D
1
AMP
RFA
AMP
2
T1D
1
AMP2
Experiment status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Biosample type
3
tissue
Organ
3
pancreas
Life stage
3
adult
Available data
3
bigWig
2
bam
2
bed narrowPeak
1
bed broadPeak
1
bedpe
1
bedpe bed3+
1
fastq
1
hic
1
tsv
Platform
1
Illumina HiSeq 2000
Run type
1
paired-ended
Read length (nt)
1
125
Library made from
3
DNA
Date released
2
March, 2020
1
October, 2017
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
Replication type
3
anisogenic
award.rfa!
AMP
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Experiment
DSR269GKW
released
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (53 years) and female adult (62 years) and male adult (34 years) and male adult (52 years)
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
T1D
Experiment
DSR886XRY
released
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (53 years) and female adult (62 years) and male adult (34 years) and male adult (52 years)
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
T1D
Experiment
TSTSR140792
released
ATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (41 year) and male adult (59 years)
Lab:
Stephen Parker, UMich
Project:
AMP