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Citing CMDGA
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Assay category
5
DNA binding
1
DNA accessibility
Assay
5
ChIP-seq
1
DNase-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
GRCh38
6
hg19
Organism
6
Homo sapiens
Target of assay
4
transcription factor
1
histone
1
histone modification
1
narrow histone mark
Biosample type
6
tissue
Organ
6
pancreas
Life stage
6
unknown
Available data
6
bam
6
bigWig
6
fastq
5
bed bed3+
1
bed narrowPeak
1
bigBed narrowPeak
Platform
5
Illumina HiSeq 2000
1
Illumina Genome Analyzer
Run type
6
single-ended
Read length (nt)
89
101
24
100
18
36
8
75
6
51
5
49
3
50
1
20
1
35
1
125
Library made from
6
DNA
Date released
6
August, 2017
Lab
6
AMP-T2D consortium
Replication type
6
anisogenic
Audit category:
5
missing controlled_by
Showing 6 of 6 results
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Experiment
TSTSR903829
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female (38 years) and male (38 years)
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR570121
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female (46 years) and male (64 years)
Target:
NKX6.1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR797006
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female (58 years) and female (63 years)
Target:
NKX2.2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR213602
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans NONE and female (63 years)
Target:
MAFB
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR644140
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male (34 years) and male (38 years)
Target:
FOXA2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR171380
released
DNase-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans
Lab:
AMP-T2D consortium
Project:
AMP