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Citing CMDGA
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Assay category
2
DNA accessibility
2
Transcription
Assay
2
ATAC-seq
2
total RNA-seq
Project
4
AMP
RFA
3
AMP
1
AMP2
Experiment status
3
released
1
archived
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Organ
4
pancreas
Life stage
4
adult
Available data
4
fastq
3
bam
3
bigWig
2
bed broadPeak
2
tsv
Platform
2
Illumina NextSeq 500
1
Illumina HiSeq 2000
1
Illumina HiSeq 2500
Run type
27
single-ended
4
paired-ended
Read length (nt)
2
75
1
50
1
125
Library made from
2
DNA
2
RNA
Date released
2
July, 2018
1
March, 2019
1
October, 2017
Lab
2
AMP-T2D consortium
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Replication type
113
unreplicated
4
anisogenic
Showing 4 of 4 results
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Experiment
TSTSR028148
released
total RNA-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (37 years) and female adult (55 years) and male adult (52 years) and male adult (57 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR752483
released
total RNA-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (48 years) and male adult (22 years) and male adult (23 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR955785
archived
ATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (52 years) and female adult (57 years) and male adult (53 years) and male adult (54 years) and male adult (59 years)
Lab:
Mark McCarthy, Oxford
Project:
AMP
Experiment
TSTSR140792
released
ATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (41 year) and male adult (59 years)
Lab:
Stephen Parker, UMich
Project:
AMP