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Citing CMDGA
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Assay category
DNA binding
4
Transcription
1
DNA accessibility
1
DNA methylation
Assay
3
total RNA-seq
1
DNase-seq
1
RRBS
1
pCHi-C
1
single cell RNA-seq
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
5
hg19
4
GRCh38
Organism
7
Homo sapiens
Biosample type
7
tissue
Organ
7
liver
Life stage
3
adult
3
embryonic
1
child
1
unknown
Available data
4
bam
4
bigWig
4
tsv
2
fastq
1
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bed narrowPeak
1
bigBed bedMethyl
1
bigBed broadPeak
1
bigBed narrowPeak
1
csv
Platform
1
Illumina Genome Analyzer IIx
1
Illumina HiSeq 2000
1
Illumina HiSeq 2500
Run type
1
paired-ended
1
single-ended
Read length (nt)
2
36
Library made from
4
RNA
3
DNA
Date released
2
July, 2019
1
August, 2017
1
February, 2021
1
March, 2020
1
November, 2018
1
October, 2019
Lab
7
AMP-T2D consortium
Replication type
unreplicated
5
anisogenic
2
isogenic
assay_slims!
DNA binding
replication_type!
unreplicated
Showing 7 of 7 results
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Experiment
DSR534MRK
released
pCHi-C
of liver
Homo sapiens
liver
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR373SNC
released
single cell RNA-seq
of liver
Homo sapiens
liver female adult (41 year) and male adult (21 year) and male adult (26 years) and male adult (44 years) and male adult (65 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR931DRP
released
total RNA-seq
of liver
Homo sapiens
liver embryo (12 weeks)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR525YKK
released
total RNA-seq
of liver
Homo sapiens
liver female embryo (20 weeks) and male embryo (22 weeks)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR485YUR
released
total RNA-seq
of liver
Homo sapiens
liver female child (6 years) and male adult (32 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR004CBL
released
DNase-seq
of liver
Homo sapiens
liver embryo (59 days) and embryo (80 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR335337
released
RRBS
of liver
Homo sapiens
liver female adult (83 years)
Lab:
AMP-T2D consortium
Project:
AMP