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Citing CMDGA
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Assay category
3
DNA binding
Assay
3
ChIP-seq
1
RRBS
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
3
Homo sapiens
Target of assay
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Biosample type
3
tissue
Organ
3
liver
Life stage
2
unknown
1
adult
Available data
3
bam
3
fastq
2
bed narrowPeak
2
bigWig
1
bed bed3+
1
bigBed narrowPeak
Platform
2
Illumina Genome Analyzer II
1
Illumina HiSeq 2500
Run type
3
single-ended
Read length (nt)
7
33
7
50
6
200
3
36
2
32
Mapped read length (nt)
1
36
Library made from
3
DNA
Date released
3
August, 2017
3
December, 2017
Lab
3
AMP-T2D consortium
Replication type
2
unreplicated
1
anisogenic
Audit category:
1
inconsistent control read length
Showing 3 of 3 results
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Experiment
TSTSR629646
released
ChIP-seq
of liver
Homo sapiens
liver
Target:
FOXA2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR190553
released
ChIP-seq
of liver
Homo sapiens
liver
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR999552
released
Audit warning
1
ChIP-seq
of liver
Homo sapiens
liver male adult (32 years)
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP