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Schema
Citing CMDGA
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Assay category
2
DNA accessibility
2
DNA methylation
Assay
159
total RNA-seq
121
ChIP-seq
13
ATAC-seq
2
DNase-seq
2
WGBS
1
Hi-C
1
RRBS
1
pCHi-C
1
single cell RNA-seq
1
small RNA-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Organ
4
liver
Life stage
2
adult
2
embryonic
child
Available data
2
bam
2
bed bed3+
2
bed broadPeak
2
bed narrowPeak
2
bigBed broadPeak
2
bigBed narrowPeak
2
bigWig
2
fastq
Platform
1
Illumina HiSeq 2000
1
Illumina HiSeq 2500
1
Illumina HiSeq 4000
Run type
2
paired-ended
Read length (nt)
2
36
Library made from
4
DNA
Date released
2
August, 2017
2
November, 2018
Lab
4
AMP-T2D consortium
Replication type
3
unreplicated
1
anisogenic
replicates.library.biosample.life_stage!
child
Showing 4 of 4 results
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Experiment
TSTSR004CBL
released
DNase-seq
of liver
Homo sapiens
liver embryo (59 days) and embryo (80 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR869ANN
released
DNase-seq
of liver
Homo sapiens
liver female embryo (113 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR259530
released
WGBS
of liver
Homo sapiens
liver female adult (25 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR873184
released
WGBS
of liver
Homo sapiens
liver male adult (31 year)
Lab:
AMP-T2D consortium
Project:
AMP